Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ybx1P62960 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ybx1P62960 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ybx1P62960 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.36□□□□□ -0.11
Ybx1P62960 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ybx1P62960 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ybx1P62960 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.36□□□□□ -0.11
Ybx1P62960 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.36□□□□□ -0.11
Ybx1P62960 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ybx1P62960 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ybx1P62960 Mir1894-201ENSMUST00000122802 81 ntBASIC14.36□□□□□ -0.11
Ybx1P62960 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.36□□□□□ -0.11
Ybx1P62960 Gm18905-201ENSMUST00000205454 928 ntBASIC14.36□□□□□ -0.11
Ybx1P62960 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.36□□□□□ -0.11
Ybx1P62960 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Gm18027-201ENSMUST00000218947 619 ntBASIC14.36□□□□□ -0.11
Ybx1P62960 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.36□□□□□ -0.11
Ybx1P62960 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.36□□□□□ -0.11
Ybx1P62960 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ybx1P62960 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.36□□□□□ -0.11
Ybx1P62960 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.35□□□□□ -0.11
Ybx1P62960 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Gm15376-201ENSMUST00000122258 783 ntBASIC14.35□□□□□ -0.11
Ybx1P62960 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.35□□□□□ -0.11
Ybx1P62960 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.35□□□□□ -0.11
Ybx1P62960 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Gm8463-201ENSMUST00000208573 613 ntBASIC14.35□□□□□ -0.11
Ybx1P62960 Gm5425-201ENSMUST00000214125 459 ntBASIC14.35□□□□□ -0.11
Ybx1P62960 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ybx1P62960 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ybx1P62960 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ybx1P62960 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ybx1P62960 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.34□□□□□ -0.11
Ybx1P62960 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms