Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.05□□□□□ -0.8
Cks1bP61025 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cks1bP61025 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.05□□□□□ -0.8
Cks1bP61025 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.05□□□□□ -0.8
Cks1bP61025 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.05□□□□□ -0.8
Cks1bP61025 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cks1bP61025 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cks1bP61025 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Cks1bP61025 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Cks1bP61025 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Cks1bP61025 Gm10231-201ENSMUST00000181584 441 ntBASIC10.05□□□□□ -0.8
Cks1bP61025 Gm27742-201ENSMUST00000184667 60 ntBASIC10.05□□□□□ -0.8
Cks1bP61025 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Gm10175-202ENSMUST00000208752 441 ntBASIC10.05□□□□□ -0.8
Cks1bP61025 Gm10252-201ENSMUST00000209541 832 ntBASIC10.05□□□□□ -0.8
Cks1bP61025 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.05□□□□□ -0.8
Cks1bP61025 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.05□□□□□ -0.8
Cks1bP61025 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1bP61025 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1bP61025 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.04□□□□□ -0.8
Cks1bP61025 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.04□□□□□ -0.8
Cks1bP61025 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Gm15358-201ENSMUST00000119249 520 ntBASIC10.04□□□□□ -0.8
Cks1bP61025 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.04□□□□□ -0.8
Cks1bP61025 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Gm27867-201ENSMUST00000184778 125 ntBASIC10.04□□□□□ -0.8
Cks1bP61025 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.04□□□□□ -0.8
Cks1bP61025 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.04□□□□□ -0.8
Cks1bP61025 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Cks1bP61025 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Grk6-205ENSMUST00000224653 2976 ntBASIC10.04□□□□□ -0.8
Cks1bP61025 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.04□□□□□ -0.8
Cks1bP61025 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.04□□□□□ -0.8
Cks1bP61025 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Cks1bP61025 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1bP61025 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cks1bP61025 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms