Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sf3b6P59708 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Sf3b6P59708 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 AW822252-206ENSMUST00000208904 237 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.47□□□□□ -0.41
Sf3b6P59708 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.46□□□□□ -0.41
Sf3b6P59708 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sf3b6P59708 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3b6P59708 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3b6P59708 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.46□□□□□ -0.41
Sf3b6P59708 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3b6P59708 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.46□□□□□ -0.41
Sf3b6P59708 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sf3b6P59708 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.46□□□□□ -0.41
Sf3b6P59708 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b6P59708 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Sf3b6P59708 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sf3b6P59708 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.46□□□□□ -0.42
Sf3b6P59708 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Sf3b6P59708 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b6P59708 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Gm16198-201ENSMUST00000118766 670 ntBASIC12.45□□□□□ -0.42
Sf3b6P59708 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.45□□□□□ -0.42
Sf3b6P59708 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b6P59708 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Sf3b6P59708 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Sf3b6P59708 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.44□□□□□ -0.42
Sf3b6P59708 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sf3b6P59708 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms