Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.85■□□□□ 0.61
Nphp4P59240 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nphp4P59240 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nphp4P59240 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nphp4P59240 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Gm38144-201ENSMUST00000192790 465 ntBASIC18.84■□□□□ 0.61
Nphp4P59240 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC18.84■□□□□ 0.61
Nphp4P59240 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.84■□□□□ 0.61
Nphp4P59240 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nphp4P59240 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nphp4P59240 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.83■□□□□ 0.61
Nphp4P59240 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Rn7sk-201ENSMUST00000083103 331 ntBASIC18.83■□□□□ 0.61
Nphp4P59240 Gm26315-201ENSMUST00000083890 321 ntBASIC18.83■□□□□ 0.61
Nphp4P59240 Gm3695-201ENSMUST00000087222 1009 ntBASIC18.83■□□□□ 0.61
Nphp4P59240 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nphp4P59240 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nphp4P59240 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nphp4P59240 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC18.83■□□□□ 0.6
Nphp4P59240 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Gm12957-201ENSMUST00000117835 377 ntBASIC18.83■□□□□ 0.6
Nphp4P59240 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC18.83■□□□□ 0.6
Nphp4P59240 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC18.83■□□□□ 0.6
Nphp4P59240 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC18.83■□□□□ 0.6
Nphp4P59240 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.83■□□□□ 0.6
Nphp4P59240 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.83■□□□□ 0.6
Nphp4P59240 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nphp4P59240 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.82■□□□□ 0.6
Nphp4P59240 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.82■□□□□ 0.6
Nphp4P59240 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nphp4P59240 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nphp4P59240 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.82■□□□□ 0.6
Nphp4P59240 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.82■□□□□ 0.6
Nphp4P59240 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Gm27331-201ENSMUST00000183705 60 ntBASIC18.82■□□□□ 0.6
Nphp4P59240 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Nphp4P59240 Itm2b-204ENSMUST00000228637 783 ntBASIC18.82■□□□□ 0.6
Nphp4P59240 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nphp4P59240 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC18.81■□□□□ 0.6
Nphp4P59240 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC18.81■□□□□ 0.6
Nphp4P59240 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Nphp4P59240 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nphp4P59240 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.81■□□□□ 0.6
Nphp4P59240 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Gm10040-201ENSMUST00000080726 1662 ntBASIC18.81■□□□□ 0.6
Nphp4P59240 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms