Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Nup43P59235 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Nup43P59235 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.28□□□□□ -0.28
Nup43P59235 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nup43P59235 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.28□□□□□ -0.28
Nup43P59235 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nup43P59235 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Nup43P59235 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nup43P59235 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.27□□□□□ -0.29
Nup43P59235 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nup43P59235 Gm27989-201ENSMUST00000184721 107 ntBASIC13.27□□□□□ -0.29
Nup43P59235 Mir7023-201ENSMUST00000185093 64 ntBASIC13.27□□□□□ -0.29
Nup43P59235 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nup43P59235 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nup43P59235 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nup43P59235 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.27□□□□□ -0.29
Nup43P59235 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nup43P59235 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nup43P59235 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nup43P59235 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nup43P59235 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nup43P59235 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup43P59235 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nup43P59235 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup43P59235 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.26□□□□□ -0.29
Nup43P59235 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.26□□□□□ -0.29
Nup43P59235 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.26□□□□□ -0.29
Nup43P59235 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Gm37714-201ENSMUST00000194742 342 ntBASIC13.26□□□□□ -0.29
Nup43P59235 Gm43703-201ENSMUST00000200523 763 ntBASIC13.26□□□□□ -0.29
Nup43P59235 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.26□□□□□ -0.29
Nup43P59235 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nup43P59235 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nup43P59235 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Nup43P59235 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup43P59235 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms