Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rrp1P56183 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.83■□□□□ 0.12
Rrp1P56183 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.83■□□□□ 0.12
Rrp1P56183 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rrp1P56183 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.83■□□□□ 0.12
Rrp1P56183 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Rrp1P56183 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rrp1P56183 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Grk6-205ENSMUST00000224653 2976 ntBASIC15.82■□□□□ 0.12
Rrp1P56183 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.82■□□□□ 0.12
Rrp1P56183 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.82■□□□□ 0.12
Rrp1P56183 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rrp1P56183 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rrp1P56183 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rrp1P56183 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.82■□□□□ 0.12
Rrp1P56183 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.82■□□□□ 0.12
Rrp1P56183 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rrp1P56183 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.81■□□□□ 0.12
Rrp1P56183 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rrp1P56183 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.81■□□□□ 0.12
Rrp1P56183 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.81■□□□□ 0.12
Rrp1P56183 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.81■□□□□ 0.12
Rrp1P56183 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.81■□□□□ 0.12
Rrp1P56183 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Rrp1P56183 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rrp1P56183 Gm29310-201ENSMUST00000185468 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21825-201ENSMUST00000185728 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm29109-201ENSMUST00000185895 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21896-201ENSMUST00000186520 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21873-201ENSMUST00000186728 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21794-201ENSMUST00000187056 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21880-201ENSMUST00000187275 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21826-201ENSMUST00000187451 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21198-201ENSMUST00000188393 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21749-201ENSMUST00000189343 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21901-201ENSMUST00000189568 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm29424-201ENSMUST00000189716 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm28599-201ENSMUST00000189838 694 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21867-201ENSMUST00000189917 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm29269-201ENSMUST00000190087 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21722-201ENSMUST00000190153 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm28423-201ENSMUST00000190701 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21899-201ENSMUST00000190745 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21910-201ENSMUST00000191163 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21849-201ENSMUST00000191571 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm28678-201ENSMUST00000191593 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm20910-201ENSMUST00000193268 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm21871-201ENSMUST00000194621 696 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.81■□□□□ 0.12
Rrp1P56183 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rrp1P56183 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rrp1P56183 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rrp1P56183 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rrp1P56183 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.81■□□□□ 0.12
Rrp1P56183 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp1P56183 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms