Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NrlP54846 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NrlP54846 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NrlP54846 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NrlP54846 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.95□□□□□ -0.02
NrlP54846 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NrlP54846 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NrlP54846 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NrlP54846 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NrlP54846 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.94□□□□□ -0.02
NrlP54846 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.94□□□□□ -0.02
NrlP54846 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.94□□□□□ -0.02
NrlP54846 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NrlP54846 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Gm18307-201ENSMUST00000206864 949 ntBASIC14.94□□□□□ -0.02
NrlP54846 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NrlP54846 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NrlP54846 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NrlP54846 Gm4984-201ENSMUST00000115987 360 ntBASIC14.93□□□□□ -0.02
NrlP54846 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.93□□□□□ -0.02
NrlP54846 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.93□□□□□ -0.02
NrlP54846 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.93□□□□□ -0.02
NrlP54846 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NrlP54846 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.93□□□□□ -0.02
NrlP54846 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.93□□□□□ -0.02
NrlP54846 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NrlP54846 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NrlP54846 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.93□□□□□ -0.02
NrlP54846 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
NrlP54846 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NrlP54846 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.92□□□□□ -0.02
NrlP54846 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Gm11425-201ENSMUST00000119608 498 ntBASIC14.92□□□□□ -0.02
NrlP54846 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NrlP54846 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.92□□□□□ -0.02
NrlP54846 Gm27892-201ENSMUST00000185017 106 ntBASIC14.92□□□□□ -0.02
NrlP54846 AY702102-202ENSMUST00000194651 1173 ntBASIC14.92□□□□□ -0.02
NrlP54846 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.92□□□□□ -0.02
NrlP54846 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NrlP54846 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NrlP54846 Gm9396-201ENSMUST00000076703 567 ntBASIC14.92□□□□□ -0.02
NrlP54846 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
NrlP54846 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NrlP54846 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms