Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ephb3P54754 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.66□□□□□ -0.06
Ephb3P54754 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.66□□□□□ -0.06
Ephb3P54754 Gm43818-201ENSMUST00000200605 466 ntBASIC14.66□□□□□ -0.06
Ephb3P54754 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.66□□□□□ -0.06
Ephb3P54754 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
Ephb3P54754 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Gm8598-201ENSMUST00000221184 836 ntBASIC14.66□□□□□ -0.06
Ephb3P54754 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ephb3P54754 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ephb3P54754 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ephb3P54754 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ephb3P54754 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Ephb3P54754 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Ephb3P54754 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Gm22331-201ENSMUST00000158066 136 ntBASIC14.65□□□□□ -0.06
Ephb3P54754 Gm7584-201ENSMUST00000175829 940 ntBASIC14.65□□□□□ -0.06
Ephb3P54754 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.65□□□□□ -0.06
Ephb3P54754 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.65□□□□□ -0.06
Ephb3P54754 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ephb3P54754 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.65□□□□□ -0.06
Ephb3P54754 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ephb3P54754 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Ephb3P54754 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ephb3P54754 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm12485-201ENSMUST00000119641 291 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ephb3P54754 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm8927-201ENSMUST00000181978 981 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gm27516-201ENSMUST00000184237 98 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm18056-201ENSMUST00000207670 568 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gm18061-201ENSMUST00000208350 562 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gm18063-201ENSMUST00000208529 568 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Gm18052-201ENSMUST00000208750 559 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm3222-201ENSMUST00000071282 990 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.64□□□□□ -0.07
Ephb3P54754 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.64□□□□□ -0.07
Ephb3P54754 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ephb3P54754 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ephb3P54754 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Ephb3P54754 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.64□□□□□ -0.07
Ephb3P54754 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms