Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pdx1P52946 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pdx1P52946 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pdx1P52946 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdx1P52946 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pdx1P52946 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pdx1P52946 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pdx1P52946 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.89□□□□□ -0.19
Pdx1P52946 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Pdx1P52946 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.89□□□□□ -0.19
Pdx1P52946 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pdx1P52946 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pdx1P52946 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Gm15460-201ENSMUST00000118147 391 ntBASIC13.89□□□□□ -0.19
Pdx1P52946 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pdx1P52946 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pdx1P52946 Gm27306-201ENSMUST00000183970 107 ntBASIC13.89□□□□□ -0.19
Pdx1P52946 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.89□□□□□ -0.19
Pdx1P52946 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pdx1P52946 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.89□□□□□ -0.19
Pdx1P52946 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.89□□□□□ -0.19
Pdx1P52946 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pdx1P52946 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pdx1P52946 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pdx1P52946 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.88□□□□□ -0.19
Pdx1P52946 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Pdx1P52946 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.88□□□□□ -0.19
Pdx1P52946 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.88□□□□□ -0.19
Pdx1P52946 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdx1P52946 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.88□□□□□ -0.19
Pdx1P52946 Gm12151-201ENSMUST00000121374 290 ntBASIC13.88□□□□□ -0.19
Pdx1P52946 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.88□□□□□ -0.19
Pdx1P52946 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdx1P52946 Gm37714-201ENSMUST00000194742 342 ntBASIC13.88□□□□□ -0.19
Pdx1P52946 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.88□□□□□ -0.19
Pdx1P52946 Gm18027-201ENSMUST00000218947 619 ntBASIC13.88□□□□□ -0.19
Pdx1P52946 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdx1P52946 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdx1P52946 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdx1P52946 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.88□□□□□ -0.19
Pdx1P52946 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdx1P52946 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pdx1P52946 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Pdx1P52946 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdx1P52946 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Pdx1P52946 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdx1P52946 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms