Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RoraP51448 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
RoraP51448 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RoraP51448 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
RoraP51448 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RoraP51448 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.29□□□□□ -0.28
RoraP51448 Gm14928-201ENSMUST00000120198 477 ntBASIC13.29□□□□□ -0.28
RoraP51448 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.29□□□□□ -0.28
RoraP51448 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.29□□□□□ -0.28
RoraP51448 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RoraP51448 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.29□□□□□ -0.28
RoraP51448 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.29□□□□□ -0.28
RoraP51448 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.29□□□□□ -0.28
RoraP51448 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RoraP51448 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.29□□□□□ -0.28
RoraP51448 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.29□□□□□ -0.28
RoraP51448 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.29□□□□□ -0.28
RoraP51448 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.29□□□□□ -0.28
RoraP51448 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.29□□□□□ -0.28
RoraP51448 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RoraP51448 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RoraP51448 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RoraP51448 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RoraP51448 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RoraP51448 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RoraP51448 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RoraP51448 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.28□□□□□ -0.28
RoraP51448 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.28□□□□□ -0.28
RoraP51448 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.28□□□□□ -0.28
RoraP51448 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Gm28760-201ENSMUST00000185995 736 ntBASIC13.28□□□□□ -0.28
RoraP51448 Gm28631-201ENSMUST00000190740 334 ntBASIC13.28□□□□□ -0.28
RoraP51448 Gm10766-202ENSMUST00000194123 606 ntBASIC13.28□□□□□ -0.28
RoraP51448 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.28□□□□□ -0.28
RoraP51448 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.28□□□□□ -0.28
RoraP51448 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
RoraP51448 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RoraP51448 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.28□□□□□ -0.28
RoraP51448 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RoraP51448 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.28□□□□□ -0.28
RoraP51448 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms