Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
GdnfP48540 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
GdnfP48540 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.33□□□□□ -0.44
GdnfP48540 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GdnfP48540 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
GdnfP48540 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Gm4995-201ENSMUST00000117247 432 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
GdnfP48540 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
GdnfP48540 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.32□□□□□ -0.44
GdnfP48540 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.32□□□□□ -0.44
GdnfP48540 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.32□□□□□ -0.44
GdnfP48540 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.32□□□□□ -0.44
GdnfP48540 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.32□□□□□ -0.44
GdnfP48540 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Gm10154-201ENSMUST00000084445 354 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GdnfP48540 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.32□□□□□ -0.44
GdnfP48540 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GdnfP48540 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.31□□□□□ -0.44
GdnfP48540 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.31□□□□□ -0.44
GdnfP48540 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
GdnfP48540 Mir3113-201ENSMUST00000175478 76 ntBASIC12.31□□□□□ -0.44
GdnfP48540 Gm27301-201ENSMUST00000184012 127 ntBASIC12.31□□□□□ -0.44
GdnfP48540 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.31□□□□□ -0.44
GdnfP48540 Gm5264-201ENSMUST00000190584 848 ntBASIC12.31□□□□□ -0.44
GdnfP48540 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.31□□□□□ -0.44
GdnfP48540 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
GdnfP48540 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GdnfP48540 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms