Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HttP42859 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.61□□□□□ -0.07
HttP42859 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HttP42859 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HttP42859 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.6□□□□□ -0.07
HttP42859 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
HttP42859 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.6□□□□□ -0.07
HttP42859 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.6□□□□□ -0.07
HttP42859 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HttP42859 Gm2231-201ENSMUST00000125661 612 ntBASIC14.6□□□□□ -0.07
HttP42859 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HttP42859 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.59□□□□□ -0.07
HttP42859 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HttP42859 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HttP42859 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
HttP42859 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HttP42859 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.59□□□□□ -0.07
HttP42859 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.59□□□□□ -0.07
HttP42859 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HttP42859 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Gm11637-201ENSMUST00000120601 592 ntBASIC14.59□□□□□ -0.07
HttP42859 Gm44069-201ENSMUST00000204898 506 ntBASIC14.59□□□□□ -0.07
HttP42859 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HttP42859 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HttP42859 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.58□□□□□ -0.07
HttP42859 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HttP42859 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HttP42859 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.58□□□□□ -0.07
HttP42859 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HttP42859 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.58□□□□□ -0.08
HttP42859 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HttP42859 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HttP42859 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.58□□□□□ -0.08
HttP42859 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.58□□□□□ -0.08
HttP42859 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.58□□□□□ -0.08
HttP42859 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HttP42859 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.58□□□□□ -0.08
HttP42859 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.58□□□□□ -0.08
HttP42859 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HttP42859 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
HttP42859 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HttP42859 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.58□□□□□ -0.08
HttP42859 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.57□□□□□ -0.08
HttP42859 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms