Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.71□□□□□ -0.54
Abca1P41233 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.71□□□□□ -0.54
Abca1P41233 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 Gm6222-201ENSMUST00000120787 396 ntBASIC11.71□□□□□ -0.54
Abca1P41233 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Abca1P41233 Gm5035-201ENSMUST00000215581 927 ntBASIC11.71□□□□□ -0.54
Abca1P41233 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.71□□□□□ -0.54
Abca1P41233 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.71□□□□□ -0.54
Abca1P41233 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.71□□□□□ -0.54
Abca1P41233 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.71□□□□□ -0.54
Abca1P41233 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Abca1P41233 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Abca1P41233 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.71□□□□□ -0.54
Abca1P41233 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Abca1P41233 BC001981-202ENSMUST00000191393 1545 ntBASIC11.7□□□□□ -0.54
Abca1P41233 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Abca1P41233 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Abca1P41233 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.7□□□□□ -0.54
Abca1P41233 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.7□□□□□ -0.54
Abca1P41233 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Abca1P41233 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Abca1P41233 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.7□□□□□ -0.54
Abca1P41233 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Abca1P41233 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Abca1P41233 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Abca1P41233 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.7□□□□□ -0.54
Abca1P41233 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Abca1P41233 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Abca1P41233 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Abca1P41233 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Abca1P41233 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.69□□□□□ -0.54
Abca1P41233 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Abca1P41233 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Gm27701-201ENSMUST00000184498 110 ntBASIC11.69□□□□□ -0.54
Abca1P41233 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 Gm37917-201ENSMUST00000194711 392 ntBASIC11.69□□□□□ -0.54
Abca1P41233 Gm45098-201ENSMUST00000207179 657 ntBASIC11.69□□□□□ -0.54
Abca1P41233 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.69□□□□□ -0.54
Abca1P41233 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Abca1P41233 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Abca1P41233 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Abca1P41233 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms