Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Gm38225-201ENSMUST00000194001 393 ntBASIC13.62□□□□□ -0.23
TfamP40630 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.62□□□□□ -0.23
TfamP40630 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.62□□□□□ -0.23
TfamP40630 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TfamP40630 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TfamP40630 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TfamP40630 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TfamP40630 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.61□□□□□ -0.23
TfamP40630 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.61□□□□□ -0.23
TfamP40630 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.61□□□□□ -0.23
TfamP40630 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.61□□□□□ -0.23
TfamP40630 Gm5264-201ENSMUST00000190584 848 ntBASIC13.61□□□□□ -0.23
TfamP40630 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 AW822252-206ENSMUST00000208904 237 ntBASIC13.61□□□□□ -0.23
TfamP40630 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TfamP40630 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TfamP40630 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TfamP40630 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TfamP40630 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.61□□□□□ -0.23
TfamP40630 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TfamP40630 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TfamP40630 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TfamP40630 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TfamP40630 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TfamP40630 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TfamP40630 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.6□□□□□ -0.23
TfamP40630 Gm11745-201ENSMUST00000121669 448 ntBASIC13.6□□□□□ -0.23
TfamP40630 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.6□□□□□ -0.23
TfamP40630 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Rprl2-201ENSMUST00000157150 290 ntBASIC13.6□□□□□ -0.23
TfamP40630 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.6□□□□□ -0.23
TfamP40630 Gm27525-201ENSMUST00000184465 107 ntBASIC13.6□□□□□ -0.23
TfamP40630 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Gm44771-201ENSMUST00000206975 626 ntBASIC13.6□□□□□ -0.23
TfamP40630 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.6□□□□□ -0.23
TfamP40630 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.6□□□□□ -0.23
TfamP40630 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.6□□□□□ -0.23
TfamP40630 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.6□□□□□ -0.23
TfamP40630 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TfamP40630 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms