Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Carlr-201ENSMUST00000181515 2574 ntBASIC11.55□□□□□ -0.56
Timp3P39876 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Timp3P39876 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Gm6222-201ENSMUST00000120787 396 ntBASIC11.55□□□□□ -0.56
Timp3P39876 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.55□□□□□ -0.56
Timp3P39876 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Timp3P39876 Gm9726-201ENSMUST00000180321 678 ntBASIC11.55□□□□□ -0.56
Timp3P39876 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Olfr286-202ENSMUST00000205305 969 ntBASIC11.55□□□□□ -0.56
Timp3P39876 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Timp3P39876 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Timp3P39876 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timp3P39876 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Timp3P39876 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.54□□□□□ -0.56
Timp3P39876 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.54□□□□□ -0.56
Timp3P39876 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Timp3P39876 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.54□□□□□ -0.56
Timp3P39876 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Gm7775-201ENSMUST00000218871 853 ntBASIC11.54□□□□□ -0.56
Timp3P39876 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.54□□□□□ -0.56
Timp3P39876 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.54□□□□□ -0.56
Timp3P39876 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.54□□□□□ -0.56
Timp3P39876 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.54□□□□□ -0.56
Timp3P39876 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.54□□□□□ -0.56
Timp3P39876 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Timp3P39876 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timp3P39876 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Timp3P39876 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Gm14719-201ENSMUST00000121891 340 ntBASIC11.53□□□□□ -0.56
Timp3P39876 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.53□□□□□ -0.56
Timp3P39876 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.53□□□□□ -0.56
Timp3P39876 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.53□□□□□ -0.56
Timp3P39876 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timp3P39876 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms