Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk2P38575 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk2P38575 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.34□□□□□ -0.43
Upk2P38575 Gm12428-201ENSMUST00000119844 727 ntBASIC12.34□□□□□ -0.43
Upk2P38575 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.34□□□□□ -0.43
Upk2P38575 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk2P38575 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.34□□□□□ -0.43
Upk2P38575 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upk2P38575 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upk2P38575 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Upk2P38575 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk2P38575 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk2P38575 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Upk2P38575 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Upk2P38575 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk2P38575 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk2P38575 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Upk2P38575 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.33□□□□□ -0.44
Upk2P38575 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk2P38575 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Gm8410-201ENSMUST00000117225 605 ntBASIC12.33□□□□□ -0.44
Upk2P38575 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.33□□□□□ -0.44
Upk2P38575 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Gm27622-201ENSMUST00000183779 60 ntBASIC12.33□□□□□ -0.44
Upk2P38575 Gm18027-201ENSMUST00000218947 619 ntBASIC12.33□□□□□ -0.44
Upk2P38575 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Upk2P38575 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk2P38575 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk2P38575 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Upk2P38575 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk2P38575 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk2P38575 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Upk2P38575 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk2P38575 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk2P38575 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Upk2P38575 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Upk2P38575 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk2P38575 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Gm15653-201ENSMUST00000119247 907 ntBASIC12.32□□□□□ -0.44
Upk2P38575 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.32□□□□□ -0.44
Upk2P38575 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Gm6916-202ENSMUST00000205523 195 ntBASIC12.32□□□□□ -0.44
Upk2P38575 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk2P38575 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk2P38575 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms