Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm13612-201ENSMUST00000119276 390 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm8927-201ENSMUST00000181978 981 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm27514-201ENSMUST00000183692 110 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm18827-201ENSMUST00000188341 790 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm45880-201ENSMUST00000213041 853 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm6983-201ENSMUST00000214912 628 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm9823-201ENSMUST00000051212 327 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm3222-201ENSMUST00000071282 990 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.93□□□□□ -0.34
Sftpa1P35242 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sftpa1P35242 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sftpa1P35242 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sftpa1P35242 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Sftpa1P35242 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.92□□□□□ -0.34
Sftpa1P35242 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sftpa1P35242 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.92□□□□□ -0.34
Sftpa1P35242 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.92□□□□□ -0.34
Sftpa1P35242 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.92□□□□□ -0.34
Sftpa1P35242 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.92□□□□□ -0.34
Sftpa1P35242 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sftpa1P35242 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.92□□□□□ -0.34
Sftpa1P35242 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sftpa1P35242 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sftpa1P35242 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sftpa1P35242 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sftpa1P35242 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.91□□□□□ -0.34
Sftpa1P35242 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sftpa1P35242 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sftpa1P35242 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sftpa1P35242 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sftpa1P35242 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sftpa1P35242 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sftpa1P35242 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.91□□□□□ -0.34
Sftpa1P35242 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.91□□□□□ -0.34
Sftpa1P35242 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sftpa1P35242 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Sftpa1P35242 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sftpa1P35242 Gm14723-201ENSMUST00000118686 215 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms