Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.11□□□□□ -0.63
Rom1P32958 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rom1P32958 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rom1P32958 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rom1P32958 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Gm25990-201ENSMUST00000102440 86 ntBASIC11.11□□□□□ -0.63
Rom1P32958 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.11□□□□□ -0.63
Rom1P32958 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.11□□□□□ -0.63
Rom1P32958 Gm44719-201ENSMUST00000206404 149 ntBASIC11.11□□□□□ -0.63
Rom1P32958 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Rom1P32958 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rom1P32958 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rom1P32958 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.11□□□□□ -0.63
Rom1P32958 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rom1P32958 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.1□□□□□ -0.63
Rom1P32958 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.1□□□□□ -0.63
Rom1P32958 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.1□□□□□ -0.63
Rom1P32958 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.1□□□□□ -0.63
Rom1P32958 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.1□□□□□ -0.63
Rom1P32958 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.1□□□□□ -0.63
Rom1P32958 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.1□□□□□ -0.63
Rom1P32958 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.1□□□□□ -0.63
Rom1P32958 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rom1P32958 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.09□□□□□ -0.63
Rom1P32958 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.09□□□□□ -0.63
Rom1P32958 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rom1P32958 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rom1P32958 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rom1P32958 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms