Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Gm28631-201ENSMUST00000190740 334 ntBASIC13.62□□□□□ -0.23
Hoxc11P31313 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxc11P31313 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Hoxc11P31313 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.61□□□□□ -0.23
Hoxc11P31313 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm22189-201ENSMUST00000103822 86 ntBASIC13.61□□□□□ -0.23
Hoxc11P31313 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm12859-201ENSMUST00000117834 427 ntBASIC13.61□□□□□ -0.23
Hoxc11P31313 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hoxc11P31313 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Hoxc11P31313 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc11P31313 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxc11P31313 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc11P31313 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hoxc11P31313 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc11P31313 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hoxc11P31313 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc11P31313 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc11P31313 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hoxc11P31313 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Hoxc11P31313 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc11P31313 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc11P31313 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc11P31313 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms