Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
Vcam1P29533 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.06■□□□□ 0.16
Vcam1P29533 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.06■□□□□ 0.16
Vcam1P29533 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vcam1P29533 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.06■□□□□ 0.16
Vcam1P29533 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vcam1P29533 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Vcam1P29533 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.06■□□□□ 0.16
Vcam1P29533 Gm2445-201ENSMUST00000182798 989 ntBASIC16.06■□□□□ 0.16
Vcam1P29533 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.06■□□□□ 0.16
Vcam1P29533 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Gm6091-201ENSMUST00000098307 165 ntBASIC16.06■□□□□ 0.16
Vcam1P29533 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Vcam1P29533 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vcam1P29533 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.06■□□□□ 0.16
Vcam1P29533 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vcam1P29533 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vcam1P29533 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.05■□□□□ 0.16
Vcam1P29533 Gm15371-201ENSMUST00000117057 784 ntBASIC16.05■□□□□ 0.16
Vcam1P29533 Gm13226-201ENSMUST00000117838 404 ntBASIC16.05■□□□□ 0.16
Vcam1P29533 Gm24196-201ENSMUST00000179161 110 ntBASIC16.05■□□□□ 0.16
Vcam1P29533 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Gm43630-201ENSMUST00000201550 776 ntBASIC16.05■□□□□ 0.16
Vcam1P29533 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vcam1P29533 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Vcam1P29533 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vcam1P29533 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.04■□□□□ 0.16
Vcam1P29533 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.04■□□□□ 0.16
Vcam1P29533 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.04■□□□□ 0.16
Vcam1P29533 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vcam1P29533 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.04■□□□□ 0.16
Vcam1P29533 Gm12134-201ENSMUST00000122109 520 ntBASIC16.04■□□□□ 0.16
Vcam1P29533 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.04■□□□□ 0.16
Vcam1P29533 Gm8598-201ENSMUST00000221184 836 ntBASIC16.04■□□□□ 0.16
Vcam1P29533 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Gm9899-201ENSMUST00000065519 555 ntBASIC16.04■□□□□ 0.16
Vcam1P29533 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcam1P29533 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms