Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Gm4804-201ENSMUST00000182234 999 ntBASIC14.43□□□□□ -0.1
Nfkb1P25799 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Gm44487-201ENSMUST00000205145 325 ntBASIC14.43□□□□□ -0.1
Nfkb1P25799 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.43□□□□□ -0.1
Nfkb1P25799 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nfkb1P25799 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.42□□□□□ -0.1
Nfkb1P25799 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.42□□□□□ -0.1
Nfkb1P25799 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Mir6392-201ENSMUST00000184924 108 ntBASIC14.42□□□□□ -0.1
Nfkb1P25799 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.42□□□□□ -0.1
Nfkb1P25799 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.42□□□□□ -0.1
Nfkb1P25799 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nfkb1P25799 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nfkb1P25799 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.41□□□□□ -0.1
Nfkb1P25799 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.41□□□□□ -0.1
Nfkb1P25799 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Gm18027-201ENSMUST00000218947 619 ntBASIC14.41□□□□□ -0.1
Nfkb1P25799 Gm19220-201ENSMUST00000222682 803 ntBASIC14.41□□□□□ -0.1
Nfkb1P25799 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Nfkb1P25799 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nfkb1P25799 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms