Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf1bP25119 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Gm14057-201ENSMUST00000120631 482 ntBASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf1bP25119 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm4875-201ENSMUST00000118257 786 ntBASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm15393-201ENSMUST00000120499 219 ntBASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm7820-201ENSMUST00000121012 1052 ntBASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm37714-201ENSMUST00000194742 342 ntBASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm18027-201ENSMUST00000218947 619 ntBASIC13□□□□□ -0.33
Tnfrsf1bP25119 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf1bP25119 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf1bP25119 Mir7684-201ENSMUST00000183858 60 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms