Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd8P23463 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd8P23463 Sybu-209ENSMUST00000228639 4113 ntBASIC14.41□□□□□ -0.1
Hoxd8P23463 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.41□□□□□ -0.1
Hoxd8P23463 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Gm12742-201ENSMUST00000117326 410 ntBASIC14.41□□□□□ -0.1
Hoxd8P23463 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxd8P23463 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxd8P23463 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxd8P23463 Gm6152-201ENSMUST00000151704 340 ntBASIC14.41□□□□□ -0.1
Hoxd8P23463 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Hoxd8P23463 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.41□□□□□ -0.1
Hoxd8P23463 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd8P23463 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd8P23463 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd8P23463 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hoxd8P23463 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.4□□□□□ -0.1
Hoxd8P23463 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Gm12957-201ENSMUST00000117835 377 ntBASIC14.4□□□□□ -0.1
Hoxd8P23463 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxd8P23463 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.4□□□□□ -0.1
Hoxd8P23463 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.4□□□□□ -0.1
Hoxd8P23463 Gm37424-201ENSMUST00000191727 561 ntBASIC14.4□□□□□ -0.1
Hoxd8P23463 Gm38144-201ENSMUST00000192790 465 ntBASIC14.4□□□□□ -0.1
Hoxd8P23463 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxd8P23463 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.4□□□□□ -0.1
Hoxd8P23463 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd8P23463 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxd8P23463 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hoxd8P23463 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.39□□□□□ -0.11
Hoxd8P23463 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd8P23463 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxd8P23463 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.39□□□□□ -0.11
Hoxd8P23463 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.39□□□□□ -0.11
Hoxd8P23463 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd8P23463 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd8P23463 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd8P23463 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd8P23463 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxd8P23463 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd8P23463 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxd8P23463 Gm8213-201ENSMUST00000118191 441 ntBASIC14.39□□□□□ -0.11
Hoxd8P23463 Gm10156-201ENSMUST00000122364 462 ntBASIC14.39□□□□□ -0.11
Hoxd8P23463 Gm24644-201ENSMUST00000157114 139 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms