Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
BdnfP21237 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
BdnfP21237 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.48□□□□□ -0.25
BdnfP21237 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.48□□□□□ -0.25
BdnfP21237 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.48□□□□□ -0.25
BdnfP21237 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.48□□□□□ -0.25
BdnfP21237 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
BdnfP21237 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.48□□□□□ -0.25
BdnfP21237 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
BdnfP21237 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.48□□□□□ -0.25
BdnfP21237 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.48□□□□□ -0.25
BdnfP21237 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
BdnfP21237 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.48□□□□□ -0.25
BdnfP21237 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.48□□□□□ -0.25
BdnfP21237 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
BdnfP21237 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.47□□□□□ -0.25
BdnfP21237 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.47□□□□□ -0.25
BdnfP21237 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
BdnfP21237 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
BdnfP21237 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
BdnfP21237 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
BdnfP21237 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.47□□□□□ -0.25
BdnfP21237 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
BdnfP21237 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
BdnfP21237 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.47□□□□□ -0.25
BdnfP21237 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
BdnfP21237 Rpph1-201ENSMUST00000175096 319 ntBASIC13.47□□□□□ -0.25
BdnfP21237 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Gm18206-201ENSMUST00000207027 926 ntBASIC13.47□□□□□ -0.25
BdnfP21237 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.47□□□□□ -0.25
BdnfP21237 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.47□□□□□ -0.25
BdnfP21237 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
BdnfP21237 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
BdnfP21237 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
BdnfP21237 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
BdnfP21237 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
BdnfP21237 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
BdnfP21237 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
BdnfP21237 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
BdnfP21237 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
BdnfP21237 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
BdnfP21237 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
BdnfP21237 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
BdnfP21237 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms