Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmga1P17095 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hmga1P17095 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga1P17095 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Hmga1P17095 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hmga1P17095 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmga1P17095 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hmga1P17095 Gm13689-201ENSMUST00000119360 685 ntBASIC14.29□□□□□ -0.12
Hmga1P17095 Gm12485-201ENSMUST00000119641 291 ntBASIC14.29□□□□□ -0.12
Hmga1P17095 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.29□□□□□ -0.12
Hmga1P17095 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.29□□□□□ -0.12
Hmga1P17095 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.29□□□□□ -0.12
Hmga1P17095 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.29□□□□□ -0.12
Hmga1P17095 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.29□□□□□ -0.12
Hmga1P17095 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Hmga1P17095 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hmga1P17095 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Hmga1P17095 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga1P17095 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Hmga1P17095 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hmga1P17095 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hmga1P17095 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hmga1P17095 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Hmga1P17095 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Gm14127-201ENSMUST00000117906 678 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hmga1P17095 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Gm8463-201ENSMUST00000208573 613 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.28□□□□□ -0.12
Hmga1P17095 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hmga1P17095 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Hmga1P17095 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hmga1P17095 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hmga1P17095 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga1P17095 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga1P17095 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga1P17095 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga1P17095 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga1P17095 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms