Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.24□□□□□ -0.45
UbbP0CG49 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.24□□□□□ -0.45
UbbP0CG49 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.24□□□□□ -0.45
UbbP0CG49 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Mir5126-201ENSMUST00000175513 77 ntBASIC12.24□□□□□ -0.45
UbbP0CG49 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Gm27628-201ENSMUST00000184911 107 ntBASIC12.24□□□□□ -0.45
UbbP0CG49 Gm18195-201ENSMUST00000207604 706 ntBASIC12.24□□□□□ -0.45
UbbP0CG49 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UbbP0CG49 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
UbbP0CG49 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UbbP0CG49 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UbbP0CG49 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.23□□□□□ -0.45
UbbP0CG49 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.23□□□□□ -0.45
UbbP0CG49 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UbbP0CG49 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
UbbP0CG49 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
UbbP0CG49 Gm13597-201ENSMUST00000121239 375 ntBASIC12.23□□□□□ -0.45
UbbP0CG49 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
UbbP0CG49 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
UbbP0CG49 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UbbP0CG49 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UbbP0CG49 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UbbP0CG49 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UbbP0CG49 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UbbP0CG49 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
UbbP0CG49 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
UbbP0CG49 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Gm28659-201ENSMUST00000188013 759 ntBASIC12.22□□□□□ -0.45
UbbP0CG49 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.22□□□□□ -0.45
UbbP0CG49 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.22□□□□□ -0.45
UbbP0CG49 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.22□□□□□ -0.45
UbbP0CG49 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UbbP0CG49 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.22□□□□□ -0.45
UbbP0CG49 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
UbbP0CG49 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.21□□□□□ -0.45
UbbP0CG49 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.21□□□□□ -0.45
UbbP0CG49 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
UbbP0CG49 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UbbP0CG49 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms