Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp6P0C0A3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.33■□□□□ 0.04
Chmp6P0C0A3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Gm9719-201ENSMUST00000162765 543 ntBASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Gm17837-201ENSMUST00000186435 985 ntBASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp6P0C0A3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Gm38294-201ENSMUST00000192831 381 ntBASIC15.32■□□□□ 0.04
Chmp6P0C0A3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.32■□□□□ 0.04
Chmp6P0C0A3 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp6P0C0A3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Gm15693-201ENSMUST00000120470 637 ntBASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Gm27622-201ENSMUST00000183779 60 ntBASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp6P0C0A3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp6P0C0A3 Gm27618-201ENSMUST00000183671 60 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms