Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC20.81■□□□□ 0.92
NclP09405 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC20.81■□□□□ 0.92
NclP09405 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NclP09405 Gm11918-201ENSMUST00000121660 179 ntBASIC20.81■□□□□ 0.92
NclP09405 Gm12134-201ENSMUST00000122109 520 ntBASIC20.81■□□□□ 0.92
NclP09405 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC20.81■□□□□ 0.92
NclP09405 Gm45059-201ENSMUST00000205558 1077 ntBASIC20.81■□□□□ 0.92
NclP09405 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC20.81■□□□□ 0.92
NclP09405 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Gm12620-201ENSMUST00000119791 1986 ntBASIC20.81■□□□□ 0.92
NclP09405 Gm12612-201ENSMUST00000140182 1986 ntBASIC20.81■□□□□ 0.92
NclP09405 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NclP09405 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC20.8■□□□□ 0.92
NclP09405 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC20.8■□□□□ 0.92
NclP09405 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NclP09405 Gm12341-201ENSMUST00000119724 503 ntBASIC20.8■□□□□ 0.92
NclP09405 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC20.8■□□□□ 0.92
NclP09405 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NclP09405 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NclP09405 AC114543.1-201ENSMUST00000226451 1558 ntBASIC20.8■□□□□ 0.92
NclP09405 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NclP09405 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Gm15240-201ENSMUST00000118156 720 ntBASIC20.79■□□□□ 0.92
NclP09405 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NclP09405 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC20.79■□□□□ 0.92
NclP09405 Gm18905-201ENSMUST00000205454 928 ntBASIC20.79■□□□□ 0.92
NclP09405 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC20.79■□□□□ 0.92
NclP09405 AC132467.2-202ENSMUST00000227726 559 ntBASIC20.79■□□□□ 0.92
NclP09405 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
NclP09405 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NclP09405 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
NclP09405 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NclP09405 Gm18187-201ENSMUST00000196476 984 ntBASIC20.78■□□□□ 0.92
NclP09405 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NclP09405 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
NclP09405 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NclP09405 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NclP09405 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC20.77■□□□□ 0.92
NclP09405 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC20.77■□□□□ 0.92
NclP09405 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.77■□□□□ 0.92
NclP09405 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NclP09405 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms