Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm2423-201ENSMUST00000074863 733 ntBASIC12.53□□□□□ -0.4
P06344 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P06344 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.53□□□□□ -0.4
P06344 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
P06344 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.53□□□□□ -0.4
P06344 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
P06344 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.53□□□□□ -0.4
P06344 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P06344 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.53□□□□□ -0.4
P06344 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.53□□□□□ -0.4
P06344 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06344 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
P06344 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06344 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Gm15460-201ENSMUST00000118147 391 ntBASIC12.52□□□□□ -0.41
P06344 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P06344 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.52□□□□□ -0.41
P06344 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.52□□□□□ -0.41
P06344 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P06344 Gm29667-201ENSMUST00000190817 490 ntBASIC12.52□□□□□ -0.41
P06344 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.52□□□□□ -0.41
P06344 Gm7730-201ENSMUST00000212486 454 ntBASIC12.52□□□□□ -0.41
P06344 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P06344 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P06344 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.52□□□□□ -0.41
P06344 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P06344 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P06344 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06344 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
P06344 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.51□□□□□ -0.41
P06344 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.51□□□□□ -0.41
P06344 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P06344 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.51□□□□□ -0.41
P06344 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.51□□□□□ -0.41
P06344 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Gm44855-201ENSMUST00000205725 362 ntBASIC12.51□□□□□ -0.41
P06344 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.51□□□□□ -0.41
P06344 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Gm20445-201ENSMUST00000061905 565 ntBASIC12.51□□□□□ -0.41
P06344 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P06344 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P06344 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06344 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms