Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Gm12428-201ENSMUST00000119844 727 ntBASIC14.22□□□□□ -0.13
PdgfrbP05622 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Gm20614-201ENSMUST00000177106 632 ntBASIC14.22□□□□□ -0.13
PdgfrbP05622 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.22□□□□□ -0.13
PdgfrbP05622 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfrbP05622 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfrbP05622 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
PdgfrbP05622 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PdgfrbP05622 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.21□□□□□ -0.13
PdgfrbP05622 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PdgfrbP05622 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PdgfrbP05622 Gm13616-201ENSMUST00000120600 222 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PdgfrbP05622 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Gm27430-201ENSMUST00000184585 107 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 Gm44333-201ENSMUST00000197168 107 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 Gm44608-201ENSMUST00000206827 855 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 Shd-206ENSMUST00000225145 998 ntBASIC14.21□□□□□ -0.13
PdgfrbP05622 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PdgfrbP05622 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PdgfrbP05622 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdgfrbP05622 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PdgfrbP05622 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.2□□□□□ -0.14
PdgfrbP05622 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Gm27618-201ENSMUST00000183671 60 ntBASIC14.2□□□□□ -0.14
PdgfrbP05622 Gm27533-201ENSMUST00000183800 152 ntBASIC14.2□□□□□ -0.14
PdgfrbP05622 Gm6916-202ENSMUST00000205523 195 ntBASIC14.2□□□□□ -0.14
PdgfrbP05622 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.2□□□□□ -0.14
PdgfrbP05622 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PdgfrbP05622 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms