Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Carlr-201ENSMUST00000181515 2574 ntBASIC11.8□□□□□ -0.52
Hoxa3P02831 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa3P02831 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa3P02831 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa3P02831 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.8□□□□□ -0.52
Hoxa3P02831 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Hoxa3P02831 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.8□□□□□ -0.52
Hoxa3P02831 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.8□□□□□ -0.52
Hoxa3P02831 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.8□□□□□ -0.52
Hoxa3P02831 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Mir125a-201ENSMUST00000083545 68 ntBASIC11.8□□□□□ -0.52
Hoxa3P02831 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxa3P02831 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxa3P02831 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxa3P02831 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxa3P02831 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxa3P02831 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hoxa3P02831 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Gm10275-202ENSMUST00000168697 495 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 Gm24694-201ENSMUST00000180054 110 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 Gm27663-201ENSMUST00000184839 110 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxa3P02831 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Gm10275-201ENSMUST00000092620 635 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxa3P02831 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxa3P02831 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxa3P02831 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 BC001981-202ENSMUST00000191393 1545 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxa3P02831 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Syt7-205ENSMUST00000224135 1557 ntBASIC11.79□□□□□ -0.52
Hoxa3P02831 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.79□□□□□ -0.52
Hoxa3P02831 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa3P02831 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.78□□□□□ -0.52
Hoxa3P02831 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms