Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf17O88472 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf17O88472 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Gm8213-201ENSMUST00000118191 441 ntBASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Gm6082-201ENSMUST00000215204 454 ntBASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.99□□□□□ -0.33
Tnfrsf17O88472 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm12203-201ENSMUST00000118235 598 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm12209-201ENSMUST00000120089 596 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm14381-201ENSMUST00000122105 414 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm6152-201ENSMUST00000151704 340 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm37986-201ENSMUST00000193285 383 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm3222-201ENSMUST00000071282 990 ntBASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf17O88472 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms