Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfdp1O88271 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cfdp1O88271 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfdp1O88271 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfdp1O88271 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.5■□□□□ 0.39
Cfdp1O88271 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cfdp1O88271 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfdp1O88271 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.49■□□□□ 0.39
Cfdp1O88271 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.49■□□□□ 0.39
Cfdp1O88271 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cfdp1O88271 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.49■□□□□ 0.39
Cfdp1O88271 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cfdp1O88271 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Cfdp1O88271 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cfdp1O88271 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.49■□□□□ 0.39
Cfdp1O88271 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cfdp1O88271 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.48■□□□□ 0.39
Cfdp1O88271 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cfdp1O88271 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.48■□□□□ 0.39
Cfdp1O88271 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.48■□□□□ 0.39
Cfdp1O88271 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.48■□□□□ 0.39
Cfdp1O88271 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.48■□□□□ 0.39
Cfdp1O88271 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cfdp1O88271 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cfdp1O88271 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.48■□□□□ 0.39
Cfdp1O88271 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cfdp1O88271 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.48■□□□□ 0.39
Cfdp1O88271 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfdp1O88271 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cfdp1O88271 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfdp1O88271 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfdp1O88271 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cfdp1O88271 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfdp1O88271 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cfdp1O88271 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.47■□□□□ 0.39
Cfdp1O88271 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfdp1O88271 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.47■□□□□ 0.39
Cfdp1O88271 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfdp1O88271 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.47■□□□□ 0.39
Cfdp1O88271 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfdp1O88271 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfdp1O88271 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.47■□□□□ 0.39
Cfdp1O88271 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cfdp1O88271 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfdp1O88271 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cfdp1O88271 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms