Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tspan6O70401 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tspan6O70401 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tspan6O70401 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.68□□□□□ -0.22
Tspan6O70401 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tspan6O70401 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Tspan6O70401 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tspan6O70401 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tspan6O70401 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tspan6O70401 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.67□□□□□ -0.22
Tspan6O70401 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Gm27892-201ENSMUST00000185017 106 ntBASIC13.67□□□□□ -0.22
Tspan6O70401 Gm43094-201ENSMUST00000196549 921 ntBASIC13.67□□□□□ -0.22
Tspan6O70401 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.67□□□□□ -0.22
Tspan6O70401 Gm6266-201ENSMUST00000203844 806 ntBASIC13.67□□□□□ -0.22
Tspan6O70401 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Tspan6O70401 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tspan6O70401 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tspan6O70401 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tspan6O70401 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tspan6O70401 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tspan6O70401 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Tspan6O70401 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.66□□□□□ -0.22
Tspan6O70401 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.66□□□□□ -0.22
Tspan6O70401 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.66□□□□□ -0.22
Tspan6O70401 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.66□□□□□ -0.22
Tspan6O70401 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.66□□□□□ -0.22
Tspan6O70401 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tspan6O70401 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
Tspan6O70401 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tspan6O70401 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tspan6O70401 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tspan6O70401 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.65□□□□□ -0.22
Tspan6O70401 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.65□□□□□ -0.22
Tspan6O70401 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.65□□□□□ -0.22
Tspan6O70401 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tspan6O70401 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.65□□□□□ -0.22
Tspan6O70401 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.65□□□□□ -0.22
Tspan6O70401 Gm44719-201ENSMUST00000206404 149 ntBASIC13.65□□□□□ -0.22
Tspan6O70401 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.65□□□□□ -0.22
Tspan6O70401 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tspan6O70401 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.65□□□□□ -0.22
Tspan6O70401 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms