Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.4■□□□□ 0.06
Trdmt1O55055 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.4■□□□□ 0.06
Trdmt1O55055 Gm24644-201ENSMUST00000157114 139 ntBASIC15.4■□□□□ 0.06
Trdmt1O55055 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Trdmt1O55055 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.4■□□□□ 0.06
Trdmt1O55055 Gm18473-201ENSMUST00000220543 868 ntBASIC15.4■□□□□ 0.06
Trdmt1O55055 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Gm24447-201ENSMUST00000083977 338 ntBASIC15.4■□□□□ 0.06
Trdmt1O55055 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trdmt1O55055 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trdmt1O55055 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trdmt1O55055 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.39■□□□□ 0.05
Trdmt1O55055 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trdmt1O55055 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Gm42550-201ENSMUST00000201553 960 ntBASIC15.39■□□□□ 0.05
Trdmt1O55055 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.39■□□□□ 0.05
Trdmt1O55055 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trdmt1O55055 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdmt1O55055 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trdmt1O55055 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trdmt1O55055 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.38■□□□□ 0.05
Trdmt1O55055 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.38■□□□□ 0.05
Trdmt1O55055 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.38■□□□□ 0.05
Trdmt1O55055 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.38■□□□□ 0.05
Trdmt1O55055 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.38■□□□□ 0.05
Trdmt1O55055 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.38■□□□□ 0.05
Trdmt1O55055 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.38■□□□□ 0.05
Trdmt1O55055 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.38■□□□□ 0.05
Trdmt1O55055 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trdmt1O55055 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm11803-201ENSMUST00000119966 444 ntBASIC15.37■□□□□ 0.05
Trdmt1O55055 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.37■□□□□ 0.05
Trdmt1O55055 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.37■□□□□ 0.05
Trdmt1O55055 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm40466-201ENSMUST00000212174 422 ntBASIC15.37■□□□□ 0.05
Trdmt1O55055 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdmt1O55055 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.37■□□□□ 0.05
Trdmt1O55055 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms