Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Npc1O35604 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.73□□□□□ -0.21
Npc1O35604 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Npc1O35604 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.73□□□□□ -0.21
Npc1O35604 Gm12428-201ENSMUST00000119844 727 ntBASIC13.73□□□□□ -0.21
Npc1O35604 Gm12151-201ENSMUST00000121374 290 ntBASIC13.73□□□□□ -0.21
Npc1O35604 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.73□□□□□ -0.21
Npc1O35604 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Npc1O35604 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.73□□□□□ -0.21
Npc1O35604 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.73□□□□□ -0.21
Npc1O35604 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Npc1O35604 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.72□□□□□ -0.21
Npc1O35604 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Npc1O35604 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Npc1O35604 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.72□□□□□ -0.21
Npc1O35604 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Gm15957-201ENSMUST00000118893 974 ntBASIC13.72□□□□□ -0.21
Npc1O35604 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.72□□□□□ -0.21
Npc1O35604 Gm27437-201ENSMUST00000183429 107 ntBASIC13.72□□□□□ -0.21
Npc1O35604 Gm44608-201ENSMUST00000206827 855 ntBASIC13.72□□□□□ -0.21
Npc1O35604 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.72□□□□□ -0.21
Npc1O35604 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.72□□□□□ -0.21
Npc1O35604 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.72□□□□□ -0.21
Npc1O35604 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.72□□□□□ -0.21
Npc1O35604 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Npc1O35604 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Npc1O35604 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Npc1O35604 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.72□□□□□ -0.21
Npc1O35604 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npc1O35604 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Npc1O35604 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.71□□□□□ -0.21
Npc1O35604 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Npc1O35604 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Npc1O35604 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Gm7063-201ENSMUST00000186840 981 ntBASIC13.71□□□□□ -0.21
Npc1O35604 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.71□□□□□ -0.21
Npc1O35604 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.71□□□□□ -0.21
Npc1O35604 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npc1O35604 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Npc1O35604 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npc1O35604 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npc1O35604 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npc1O35604 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npc1O35604 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npc1O35604 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms