Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trove2O08848 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trove2O08848 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trove2O08848 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trove2O08848 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.43□□□□□ -0.1
Trove2O08848 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.43□□□□□ -0.1
Trove2O08848 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.43□□□□□ -0.1
Trove2O08848 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.43□□□□□ -0.1
Trove2O08848 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trove2O08848 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.43□□□□□ -0.1
Trove2O08848 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.43□□□□□ -0.1
Trove2O08848 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.43□□□□□ -0.1
Trove2O08848 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trove2O08848 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.43□□□□□ -0.1
Trove2O08848 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.43□□□□□ -0.1
Trove2O08848 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trove2O08848 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trove2O08848 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.42□□□□□ -0.1
Trove2O08848 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Trove2O08848 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.42□□□□□ -0.1
Trove2O08848 Psmb5-202ENSMUST00000227257 622 ntBASIC14.42□□□□□ -0.1
Trove2O08848 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trove2O08848 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trove2O08848 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trove2O08848 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trove2O08848 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trove2O08848 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trove2O08848 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trove2O08848 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.41□□□□□ -0.1
Trove2O08848 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.41□□□□□ -0.1
Trove2O08848 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.41□□□□□ -0.1
Trove2O08848 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Trove2O08848 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.41□□□□□ -0.1
Trove2O08848 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.41□□□□□ -0.1
Trove2O08848 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trove2O08848 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trove2O08848 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.41□□□□□ -0.1
Trove2O08848 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trove2O08848 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms