Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
B020004C17RikJ3QP07 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Gm14723-201ENSMUST00000118686 215 ntBASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Snora73a-201ENSMUST00000082453 205 ntBASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
B020004C17RikJ3QP07 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Gm26927-201ENSMUST00000182385 965 ntBASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Gm26315-201ENSMUST00000083890 321 ntBASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
B020004C17RikJ3QP07 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Gm22018-201ENSMUST00000104357 131 ntBASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms