Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3727J3QM54 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.92□□□□□ -0.5
Gm3727J3QM54 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.92□□□□□ -0.5
Gm3727J3QM54 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3727J3QM54 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3727J3QM54 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm3727J3QM54 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3727J3QM54 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms