Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Gm11618-201ENSMUST00000117946 267 ntBASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Gm38317-201ENSMUST00000195564 343 ntBASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc188F6WEU2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Gm13123-201ENSMUST00000122173 492 ntBASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc188F6WEU2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Gm8194-201ENSMUST00000159783 859 ntBASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Gm31256-201ENSMUST00000194705 506 ntBASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Gm24447-201ENSMUST00000083977 338 ntBASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc188F6WEU2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc188F6WEU2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms