Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Gm13612-201ENSMUST00000119276 390 ntBASIC16.79■□□□□ 0.28
Ube4aE9Q735 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.79■□□□□ 0.28
Ube4aE9Q735 Gm43630-201ENSMUST00000201550 776 ntBASIC16.79■□□□□ 0.28
Ube4aE9Q735 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ube4aE9Q735 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Gm27847-201ENSMUST00000183711 107 ntBASIC16.78■□□□□ 0.28
Ube4aE9Q735 Gm27375-201ENSMUST00000183799 107 ntBASIC16.78■□□□□ 0.28
Ube4aE9Q735 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.78■□□□□ 0.28
Ube4aE9Q735 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.78■□□□□ 0.28
Ube4aE9Q735 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.78■□□□□ 0.28
Ube4aE9Q735 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ube4aE9Q735 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Gm13226-201ENSMUST00000117838 404 ntBASIC16.77■□□□□ 0.28
Ube4aE9Q735 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Gm6091-201ENSMUST00000098307 165 ntBASIC16.77■□□□□ 0.28
Ube4aE9Q735 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.77■□□□□ 0.28
Ube4aE9Q735 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube4aE9Q735 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ube4aE9Q735 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube4aE9Q735 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube4aE9Q735 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ube4aE9Q735 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms