Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Gm5279-201ENSMUST00000199575 745 ntBASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Gm18905-201ENSMUST00000205454 928 ntBASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb9E9Q5G2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Mir698-201ENSMUST00000102164 109 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Gm28631-201ENSMUST00000190740 334 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb9E9Q5G2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Gm24420-201ENSMUST00000176676 59 ntBASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb9E9Q5G2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb9E9Q5G2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms