Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Gm12585-201ENSMUST00000117307 290 ntBASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Gm15460-201ENSMUST00000118147 391 ntBASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Gm15393-201ENSMUST00000120499 219 ntBASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Gm10766-202ENSMUST00000194123 606 ntBASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Gm9797-201ENSMUST00000052902 613 ntBASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh17E9PXF0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh17E9PXF0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh17E9PXF0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Pcdh17E9PXF0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Gm23984-201ENSMUST00000157139 203 ntBASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Gm28760-201ENSMUST00000185995 736 ntBASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Gm8515-201ENSMUST00000194852 576 ntBASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Gm6180-201ENSMUST00000065243 498 ntBASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms