Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Srp54bE9PXC0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Srp54bE9PXC0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Srp54bE9PXC0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Srp54bE9PXC0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Srp54bE9PXC0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Srp54bE9PXC0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Gm15806-201ENSMUST00000120696 955 ntBASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Srp54bE9PXC0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.81□□□□□ -0.2
Srp54bE9PXC0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms