Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hfm1D3Z4R1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hfm1D3Z4R1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Gm18244-201ENSMUST00000219747 1566 ntBASIC19.38■□□□□ 0.69
Hfm1D3Z4R1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Gm8584-201ENSMUST00000171982 758 ntBASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hfm1D3Z4R1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Gm8793-201ENSMUST00000183069 1303 ntBASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Gm5363-201ENSMUST00000211927 938 ntBASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 AC134254.1-201ENSMUST00000221362 167 ntBASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 AC022775.2-201ENSMUST00000227885 646 ntBASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hfm1D3Z4R1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hfm1D3Z4R1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms