Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tmf1B9EKI3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Gm18905-201ENSMUST00000205454 928 ntBASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tmf1B9EKI3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmf1B9EKI3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmf1B9EKI3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms