Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc22a28B2RT89 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Gm38225-201ENSMUST00000194001 393 ntBASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Gm5364-201ENSMUST00000216789 889 ntBASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Gm18041-201ENSMUST00000218210 618 ntBASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 BC001981-202ENSMUST00000191393 1545 ntBASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc22a28B2RT89 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc22a28B2RT89 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 AA543401-201ENSMUST00000164248 1269 ntBASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Gm44719-201ENSMUST00000206404 149 ntBASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc22a28B2RT89 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms