Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Gm14057-201ENSMUST00000120631 482 ntBASIC14.18□□□□□ -0.14
Rrn3B2RS91 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Mir8102-201ENSMUST00000184148 139 ntBASIC14.18□□□□□ -0.14
Rrn3B2RS91 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.18□□□□□ -0.14
Rrn3B2RS91 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.18□□□□□ -0.14
Rrn3B2RS91 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Mir125a-201ENSMUST00000083545 68 ntBASIC14.18□□□□□ -0.14
Rrn3B2RS91 BC001981-202ENSMUST00000191393 1545 ntBASIC14.18□□□□□ -0.14
Rrn3B2RS91 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rrn3B2RS91 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.17□□□□□ -0.14
Rrn3B2RS91 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Gm13223-201ENSMUST00000118609 747 ntBASIC14.17□□□□□ -0.14
Rrn3B2RS91 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Mir7684-201ENSMUST00000183858 60 ntBASIC14.17□□□□□ -0.14
Rrn3B2RS91 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.17□□□□□ -0.14
Rrn3B2RS91 Shd-206ENSMUST00000225145 998 ntBASIC14.17□□□□□ -0.14
Rrn3B2RS91 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.17□□□□□ -0.14
Rrn3B2RS91 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.17□□□□□ -0.14
Rrn3B2RS91 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Mir1897-201ENSMUST00000122581 272 ntBASIC14.16□□□□□ -0.14
Rrn3B2RS91 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.16□□□□□ -0.14
Rrn3B2RS91 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rrn3B2RS91 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms