Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col4a6B1AVK5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Gm16570-201ENSMUST00000161951 436 ntBASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.17□□□□□ -0.14
Col4a6B1AVK5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Gm8227-201ENSMUST00000223306 571 ntBASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Gm12363-201ENSMUST00000122250 668 ntBASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col4a6B1AVK5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gm6447-201ENSMUST00000118905 835 ntBASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gm21769-201ENSMUST00000211922 111 ntBASIC14.16□□□□□ -0.14
Col4a6B1AVK5 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col4a6B1AVK5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Gm16372-201ENSMUST00000073088 450 ntBASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.15□□□□□ -0.14
Col4a6B1AVK5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms