Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Mir125a-201ENSMUST00000083545 68 ntBASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.41□□□□□ -0.1
Tubb1A2AQ07 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.4□□□□□ -0.1
Tubb1A2AQ07 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Chchd1-203ENSMUST00000224633 557 ntBASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tubb1A2AQ07 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Gm9719-201ENSMUST00000162765 543 ntBASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubb1A2AQ07 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Gm24513-201ENSMUST00000174964 138 ntBASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubb1A2AQ07 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms